The detailed information of tRNA gene sequence


Sequence ID>WENV170668686
Genome IDLAHQ01014838
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1884
End posion on genome 1813
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cccgcccagc
tRNA gene sequence 
GGGCCGGTAGATCAGGGGTAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCAAATC
CCGACCGGTCCAtgg
Downstream region at tRNA end position 
ggattctctc
Secondary structure (Cloverleaf model)
>WENV170668686	Ala	GGC
                   c      Atgg ggattctctc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A G C C C     A
        G A        A      | | | | |     A
      G     C T A G       T C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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