The detailed information of tRNA gene sequence


Sequence ID>WENV170668708
Genome IDLAHQ01018288
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 3728
End posion on genome 3802
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atcattgcac
tRNA gene sequence 
GGTCCCATCGTCTAGTGGTTAGGACGCTGGCCTCTCACGCCGGAAACCGGGGTTCAAACC
CCCGTGGGACTACCA
Downstream region at tRNA end position 
aatcttactc
Secondary structure (Cloverleaf model)
>WENV170668708	Glu	CTC
                   c      ACCA aatcttactc
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     G C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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