The detailed information of tRNA gene sequence


Sequence ID>WENV170668711
Genome IDLAHQ01019388
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 348
End posion on genome 422
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcattggtcc
tRNA gene sequence 
GGGCCGGTAGCTTAGTCAGGCAGAGCGAAAGGCTCTTAACCTTTAGGTCGGGGGTTCAAA
TCCCTCTCGGCCCGCtt
Downstream region at tRNA end position 
aaaagaacgg
Secondary structure (Cloverleaf model)
>WENV170668711	Lys	CTT
                   c      GCtt aaaagaacgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       T T C G       G G G G G     C
    A       + | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    A - T
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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