The detailed information of tRNA gene sequence


Sequence ID>WENV170668719
Genome IDLAHQ01021769
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1046
End posion on genome 970
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
accagaaact
tRNA gene sequence 
GCCCAGGTAGCTCAGTCCGGGAGAGCGTCAGACTGAAGATCTGAACGTCCCCGGTTCGAA
TCCGGGTCTGGGCACTA
Downstream region at tRNA end position 
attttctttt
Secondary structure (Cloverleaf model)
>WENV170668719	Phe	GAA
                   t      ACTA attttctttt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G G G C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        G     ACGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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