The detailed information of tRNA gene sequence


Sequence ID>WENV170668731
Genome IDLAHQ01023100
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 2036
End posion on genome 2110
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ggccaccggc
tRNA gene sequence 
GCTCCGGTAGTGTAGCTCGGCCAATCATGCAGGACTCTCACTCCTGCGACTGGGGTTCAA
ATCCCCACCGGAGCAtcc
Downstream region at tRNA end position 
ttttactagt
Secondary structure (Cloverleaf model)
>WENV170668731	Glu	CTC
                   c      Atcc ttttactagt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A C C C C     A
    T C G A        A      | | | | |     A
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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