The detailed information of tRNA gene sequence


Sequence ID>WENV170668803
Genome IDLAHQ01051054
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 167
End posion on genome 242
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gagggtgcgG
tRNA gene sequence 
GCCTCGGTGGCTCAGCTGGCTAGAGCGAGTGACTTGTAATCACTAGGTCGCGTGTTCGAA
TCACGCCCGGGGCTTaa
Downstream region at tRNA end position 
ataatctata
Secondary structure (Cloverleaf model)
>WENV170668803	Thr	TGT
                   G      TTaa ataatctata
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C A C     A
      C G A        G      | | | | |     G
    T       C T C G       G C G T G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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