The detailed information of tRNA gene sequence


Sequence ID>WENV170668822
Genome IDLAHQ01057932
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 196
End posion on genome 121
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gagttttgct
tRNA gene sequence 
GGGGGTGTAGCTCAGATGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCAATC
CCGTTCACCTCCACCA
Downstream region at tRNA end position 
gtgcgcagta
Secondary structure (Cloverleaf model)
>WENV170668822	Ala	TGC
                   t      ACCA gtgcgcagta
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T T G C C     A
      A G A        A      |   | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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