The detailed information of tRNA gene sequence


Sequence ID>WENV170668853
Genome IDLAHQ01067305
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 127
End posion on genome 51
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgaataattT
tRNA gene sequence 
GGGACCATAGGGTAGCTTGGTCGATCCTTTGGGCTTTGGGAGCCTGAGACTCCGGTTCAA
ATCCGGGTGGTCCCATta
Downstream region at tRNA end position 
aagatcatct
Secondary structure (Cloverleaf model)
>WENV170668853	Pro	TGG
                   T      ATta aagatcatct
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
    T C G A        A      + | | | |     A
  T         T G G G       T C C G G     C
  G           | | +                 T T
  G         T C C T
    T C G A        T     AGAC
                    T + G
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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