The detailed information of tRNA gene sequence


Sequence ID>WENV170668924
Genome IDLAHQ01127607
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 260
End posion on genome 183
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcacatatta
tRNA gene sequence 
GGAGCATTAGTGTAGTCTGGCTATCATTCGACGTTTGGAATGTCGAGGTCGGTGGTTCAA
ATCCGCCATGCTCCATCA
Downstream region at tRNA end position 
tttttaaata
Secondary structure (Cloverleaf model)
>WENV170668924	Pro	TGG
                   a      ATCA tttttaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     C C G C C     A
    C T G A        A      | | + | |     A
  T         T G T G       G G T G G     C
  G           | | +                 T T
  G         T C A T
    C T A          T     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    G + T
                  T       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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