The detailed information of tRNA gene sequence


Sequence ID>WENV170668942
Genome IDLAHR01000116
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 12114
End posion on genome 12199
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttatatggtT
tRNA gene sequence 
GCGGGGTTCGCCAAGCTGGCCAAAGGCGCAGGACTTAAGATCCTGTCTCGCAGGAGTTCG
CGGGTTCGAATCCCGTACCCCGCATta
Downstream region at tRNA end position 
aacctttttc
Secondary structure (Cloverleaf model)
>WENV170668942	Leu	TAA
                   T      ATta aacctttttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    T C G A        C      + | | | |     G
  G         A C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    C A A          G     TCTCGCAGGAGTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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