The detailed information of tRNA gene sequence


Sequence ID>WENV170669024
Genome IDLAHR01002457
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5407
End posion on genome 5331
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
taagacttgt
tRNA gene sequence
GGCGGTGTAGCTCAGCTGGTTAGAGCGTCGGAATCATAATCCGCAGGTCCGGGGTTCAAA
TCCCTGCGCCGCTACCA
Downstream region at tRNA end position
gttttttttg
Secondary structure (Cloverleaf model)
>WENV170669024	Met	CAT
                   t      ACCA gttttttttg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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