The detailed information of tRNA gene sequence


Sequence ID>WENV170669058
Genome IDLAHR01004343
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 27088
End posion on genome 27001
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagggtcaga
tRNA gene sequence 
GTCGAGGTCGCCTAGCTTGGTATGGCGCAGGTTTGCTAAACCTGTTCCGCTCCGCGGATC
GTGGGTTCGAATCCCACCCTCGGCGCTA
Downstream region at tRNA end position 
ttttaccagt
Secondary structure (Cloverleaf model)
>WENV170669058	Ser	GCT
                   a      GCTA ttttaccagt
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    T       T C C G       G T G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TTCCGCTCCGCGGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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