The detailed information of tRNA gene sequence


Sequence ID>WENV170669107
Genome IDLAHR01009683
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 111
End posion on genome 187
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaagtttact
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTGTTGATAACGCGGGGGTCGTTGGTTCGAG
TCCTACCAGACCCACCA
Downstream region at tRNA end position 
gttgggggat
Secondary structure (Cloverleaf model)
>WENV170669107	Ile	GAT
                   t      ACCA gttgggggat
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C A T C C     A
      C G A        A      | |   | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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