The detailed information of tRNA gene sequence


Sequence ID>WENV170669112
Genome IDLAHR01010640
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 3378
End posion on genome 3451
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gagcagaaaT
tRNA gene sequence 
GGGCTTGTAGATCAGTGGTAGATCGCCGCCTTCGCAAGGCGGAGGCCACGGGTTCGAATC
CCGTCAAGTCCATag
Downstream region at tRNA end position 
acatcattta
Secondary structure (Cloverleaf model)
>WENV170669112	Ala	CGC
                   T      ATag acatcattta
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     G
      T     C T A G       A C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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