The detailed information of tRNA gene sequence


Sequence ID>WENV170669161
Genome IDLAHR01022149
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 394
End posion on genome 471
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
accagtagag
tRNA gene sequence 
GGGGTTGTAGGGTAGCCTGGTCCATCCTACAGCGTTCGGGACGCTGTGACCTGAGTTCGA
ATCTCAGCAACCCCATCA
Downstream region at tRNA end position 
tactcttcct
Secondary structure (Cloverleaf model)
>WENV170669161	Pro	CGG
                   g      ATCA tactcttcct
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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