The detailed information of tRNA gene sequence


Sequence ID>WENV170669288
Genome IDLAHR01097338
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 248
End posion on genome 325
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
taaaaggttt
tRNA gene sequence 
GGGGTTGTGGGGTAGCCTGGTCCATCCCTCGGCGTTCGGGACGCCGTAACCTGAGTTCGA
ATCTCAGCAACCCCACCA
Downstream region at tRNA end position 
tttgcctttc
Secondary structure (Cloverleaf model)
>WENV170669288	Pro	CGG
                   t      ACCA tttgcctttc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    C C G A        G      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | |                 T T
  G         T C C C
    T C C A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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