The detailed information of tRNA gene sequence


Sequence ID>WENV170669380
Genome IDLAHS01000063
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 178322
End posion on genome 178397
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
aatattccaa
tRNA gene sequence
GCCCGCTTAGCTCAGTTGGTAGAGCACGTCATTCGTAATGATGGGGCCGGTGGTTCGAAT
CCGCCAGCGGGCACCA
Downstream region at tRNA end position
tttccctttc
Secondary structure (Cloverleaf model)
>WENV170669380	Thr	CGT
                   a      ACCA tttccctttc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    C - G
                    G + T
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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