The detailed information of tRNA gene sequence


Sequence ID>WENV170669384
Genome IDLAHS01000063
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 49818
End posion on genome 49743
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcctcagctt
tRNA gene sequence 
GTCCCGTTCGTCTAGAGGCCTAGGACATCGCCCTCTCACGGCGACAACACGGGTTCGAAT
CCCGTACGGGACGCCA
Downstream region at tRNA end position 
ttgatttggc
Secondary structure (Cloverleaf model)
>WENV170669384	Glu	CTC
                   t      GCCA ttgatttggc
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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