The detailed information of tRNA gene sequence


Sequence ID>WENV170669460
Genome IDLAHS01000243
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 11805
End posion on genome 11892
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccatcatta
tRNA gene sequence 
GGAGAGATGGTAGAGTGGTCGATTACAGCGGTCTTGAAAACCGCCGTGCTGCGAGGCACC
GGGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
ataagggtgt
Secondary structure (Cloverleaf model)
>WENV170669460	Ser	TGA
                   a      GCAA ataagggtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A T G       G G G G G     C
    G       + | | |                 T T
    T       T T A C
      C G A        A     CGTGCTGCGAGGCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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