The detailed information of tRNA gene sequence


Sequence ID>WENV170669479
Genome IDLAHS01000332
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 43325
End posion on genome 43241
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
agtaatgcgc
tRNA gene sequence 
GCGGGCGTGGTGGAATTGGTAGACACGCCAGATTTAGGTTCTGGTGACGCAAGTTGTGGG
GGTTCAAGTCCCTCCGCCCGTACCA
Downstream region at tRNA end position 
cacaagtttc
Secondary structure (Cloverleaf model)
>WENV170669479	Leu	TAG
                   c      ACCA cacaagtttc
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     A
    T       G G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGACGCAAGTTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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