The detailed information of tRNA gene sequence


Sequence ID>WENV170669480
Genome IDLAHS01000332
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 36375
End posion on genome 36301
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cataagccgc
tRNA gene sequence 
GGGCGATTAGCTTAGCGGTAGAGCATCTCGTTTACACCGAGAGGGTCGGCGGTTCGATCC
CGTCATCGCCCACCA
Downstream region at tRNA end position 
taaattccct
Secondary structure (Cloverleaf model)
>WENV170669480	Val	TAC
                   c      ACCA taaattccct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C T
                    T     C T G C C     A
        G A        A      | + | | |     G
      C     T T C G       G G C G G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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