The detailed information of tRNA gene sequence


Sequence ID>WENV170669499
Genome IDLAHS01000342
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 53213
End posion on genome 53138
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aaagacaggc
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCCTCGTTCGCAATGAGGAGGTCAGGGGTTCGATT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
tccgcctgat
Secondary structure (Cloverleaf model)
>WENV170669499	Ala	CGC
                   c      ACCA tccgcctgat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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