The detailed information of tRNA gene sequence


Sequence ID>WENV170669535
Genome IDLAHS01000438
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 2422
End posion on genome 2348
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aaccaacatg
tRNA gene sequence 
GTGGATGTAGTTCAGTTGGTTAGAGCGTCAGATTGTGGTTCTGAATGTCGTGGGTTCGAG
TCCCACCCTCCACCCtt
Downstream region at tRNA end position 
tcctatcaag
Secondary structure (Cloverleaf model)
>WENV170669535	His	GTG
                   g      CCtt tcctatcaag
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     T   C
                     G - C          T G
                    T     C A C C C     A
      T G A        A      | | | | |     G
    T       C T T G       G T G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        G     ATGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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