The detailed information of tRNA gene sequence


Sequence ID>WENV170669578
Genome IDLAHS01000607
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 857
End posion on genome 781
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccatcttaaa
tRNA gene sequence 
GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGCAGGTTCGAG
TCCTGCAAGGTCCACCA
Downstream region at tRNA end position 
tttatataat
Secondary structure (Cloverleaf model)
>WENV170669578	Met	CAT
                   a      ACCA tttatataat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G - C
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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