The detailed information of tRNA gene sequence


Sequence ID>WENV170669581
Genome IDLAHS01000607
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 540
End posion on genome 465
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaaccaaat
tRNA gene sequence 
GGTCCCGTGGTGTAGCGGTTAACATGCCTGCCTGTCACGCAGGAGATCGCCGGTTCGATC
CCGGTCGGGACCGCCA
Downstream region at tRNA end position 
ttttaaaata
Secondary structure (Cloverleaf model)
>WENV170669581	Asp	GTC
                   t      GCCA ttttaaaata
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     T G G C C     A
      C G A        G      + | | | |     G
    G       T G T G       G C C G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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