The detailed information of tRNA gene sequence


Sequence ID>WENV170669586
Genome IDLAHS01000607
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 108
End posion on genome 18
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttatttat
tRNA gene sequence 
GGGGAAGTACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGTAACCGG
CGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
ttggcccctt
Secondary structure (Cloverleaf model)
>WENV170669586	Ser	GCT
                   t      GCCA ttggcccctt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGTAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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