The detailed information of tRNA gene sequence


Sequence ID>WENV170669588
Genome IDLAHS01000610
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 10964
End posion on genome 10890
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaagagatt
tRNA gene sequence 
GGTGCGCTAGTTCAGTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCACGAGTTCGAG
TCTCGTGCGCACCGCtt
Downstream region at tRNA end position 
ctatttgctt
Secondary structure (Cloverleaf model)
>WENV170669588	Asp	GTC
                   t      GCtt ctatttgctt
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     C - G          T G
                    T     T G C T C     A
      T G A        A      | | | | |     G
    T       C T T G       A C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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