The detailed information of tRNA gene sequence


Sequence ID>WENV170669596
Genome IDLAHS01000648
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 26682
End posion on genome 26607
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaattttttt
tRNA gene sequence 
ACGGGTTTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGAGAGTTCGAGT
CTTTCAACCCGTGCAA
Downstream region at tRNA end position 
aacagaagat
Secondary structure (Cloverleaf model)
>WENV170669596	Trp	CCA
                   t      GCAA aacagaagat
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     C T T T C     A
      T G A        A      | | + | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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