The detailed information of tRNA gene sequence


Sequence ID>WENV170669630
Genome IDLAHS01000943
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 2571
End posion on genome 2497
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ctacatattc
tRNA gene sequence 
GGGCGTTTAGCTCAGGGGGAGAGCGCTTCCCTGACACGGAAGAGGTCGCAAGTTCAAATC
TTGCAACGCCCACCA
Downstream region at tRNA end position 
aaacaccgag
Secondary structure (Cloverleaf model)
>WENV170669630	Val	GAC
                   c      ACCA aaacaccgag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A          T A
                    T     C G T T C     A
        G A        A      | | | | |     A
      G     C T C G       G C A A G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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