The detailed information of tRNA gene sequence


Sequence ID>WENV170669650
Genome IDLAHS01001063
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 66874
End posion on genome 66800
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accaaacgat
tRNA gene sequence 
GGCGGCGTAGCTCAGTGGTAGAGCAGGGGAATCATAATCCCTTGGTCGGAGGTTCAAATC
CTTCCGCCGCTACCA
Downstream region at tRNA end position 
gtttttcttc
Secondary structure (Cloverleaf model)
>WENV170669650	Met	CAT
                   t      ACCA gtttttcttc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T T C C     A
        G A        A      | + | | |     A
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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