The detailed information of tRNA gene sequence


Sequence ID>WENV170669651
Genome IDLAHS01001075
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1252
End posion on genome 1325
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actgcaccac
tRNA gene sequence 
GGTCCGGTGGCAGAATGGTGATGTAGCGGACTGCAAATCCGCGTATGTGGGTTCGATTCC
CGCCCGGACCTCCA
Downstream region at tRNA end position 
tttcccttgt
Secondary structure (Cloverleaf model)
>WENV170669651	Cys	GCA
                   c      TCCA tttcccttgt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C G C C C     A
        A A        G      | + | | |     G
      T     G A C G       G T G G G     C
      G       | | +                 T T
      G     A T G T
        T G        A     GTAT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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