The detailed information of tRNA gene sequence


Sequence ID>WENV170669657
Genome IDLAHS01001187
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 22013
End posion on genome 21938
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtccttattt
tRNA gene sequence 
GCCGGTGTAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCGTGGGTTCGACT
CCTATCGCCGGCACCA
Downstream region at tRNA end position 
tcccttggag
Secondary structure (Cloverleaf model)
>WENV170669657	Thr	TGT
                   t      ACCA tcccttggag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T C
                    T     T A T C C     A
      T G A        A      + | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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