The detailed information of tRNA gene sequence


Sequence ID>WENV170669769
Genome IDLAHS01002394
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 30258
End posion on genome 30168
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctctcgcgct
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTTAAGGCGCACGCTTGGAAAGCGTGTGTACGTTAATAGCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgccacttaa
Secondary structure (Cloverleaf model)
>WENV170669769	Ser	GGA
                   t      GCCA tgccacttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTACGTTAATAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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