The detailed information of tRNA gene sequence


Sequence ID>WENV170669792
Genome IDLAHS01003207
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 154
End posion on genome 78
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atctgatcat
tRNA gene sequence 
GCAACGTTGCCGGAGTCTGGTAACGGCTCTCGCTGCAAACGAGATGAGCACTGGTTCGAA
TCCAGTACGTTGCTCCA
Downstream region at tRNA end position 
agcgcctttg
Secondary structure (Cloverleaf model)
>WENV170669792	Cys	GCA
                   t      TCCA agcgcctttg
                     G - C
                     C - G
                     A - T
                     A - T
                     C - G
                     G - C
                     T - A          T A
                    T     T G A C C     A
      T G A        G      | | | | |     G
    C       G G C C       A C T G G     C
    T         | | |                 T T
    G       A C G G
      G T A        C     TGAGC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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