The detailed information of tRNA gene sequence


Sequence ID>WENV170669824
Genome IDLAHS01003738
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 79
End posion on genome 167
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acttccgttt
tRNA gene sequence 
GGAGCAATACCCAAGCGGCTGAAGGGACTGGTTTCGAAAACCAGCAGTAGGGAAACCTAG
CGGGGGTTCAAATCCCCCTTGCTCCGCCA
Downstream region at tRNA end position 
tcgattaaaa
Secondary structure (Cloverleaf model)
>WENV170669824	Ser	CGA
                   t      GCCA tcgattaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    G       A C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     CAGTAGGGAAACCTAGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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