The detailed information of tRNA gene sequence


Sequence ID>WENV170669968
Genome IDLAHS01011365
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 144
End posion on genome 231
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctttttcatt
tRNA gene sequence 
GGAGAGATGGTAGAGTGGTCGATTACAGCGGTCTTGAAAACCGCCGTGCTGAGAGGCACC
GGGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
caaacgctga
Secondary structure (Cloverleaf model)
>WENV170669968	Ser	TGA
                   t      GCAA caaacgctga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A T G       G G G G G     C
    G       + | | |                 T T
    T       T T A C
      C G A        A     CGTGCTGAGAGGCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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