The detailed information of tRNA gene sequence


Sequence ID>WENV170670153
Genome IDLAHS01069511
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 203
End posion on genome 128
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
attgaattag
tRNA gene sequence 
CGGGATGTAGCACAGTTGGTAGCGCGCCACGTTCGGGACGTGGAGGTCGGAAGTTCGAGT
CTTCTTATCCCGACTA
Downstream region at tRNA end position 
atctgagggt
Secondary structure (Cloverleaf model)
>WENV170670153	Pro	CGG
                   g      ACTA atctgagggt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G + T          T G
                    T     T C T T C     A
      T G A        A      + | | | |     G
    T       C A C G       G G A A G     C
    G       |   | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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