The detailed information of tRNA gene sequence


Sequence ID>WENV170670209
Genome IDLAHS01109082
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 417
End posion on genome 341
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattttatat
tRNA gene sequence 
GGCGGAATAGCTCAGCTGGCTAGAGCATTCGGTTCATACCCGAAGTGTCGTAGGTTCAAG
TCCTATTTCCGCTACCA
Downstream region at tRNA end position 
aaacaaccta
Secondary structure (Cloverleaf model)
>WENV170670209	Met	CAT
                   t      ACCA aaacaaccta
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T A T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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