The detailed information of tRNA gene sequence


Sequence ID>WENV170670229
Genome IDLAHT01000077
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1662
End posion on genome 1588
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgagaggtgt
tRNA gene sequence 
GCCTCGGTAGCTCAGCTGGTCCAGAGCGATTGACTTGTAATCAATAGGTCGCGTGTTCGA
ATCACGCTCGGGGCTttt
Downstream region at tRNA end position 
ctttaaaaaa
Secondary structure (Cloverleaf model)
>WENV170670229	Thr	TGT
                   t      Tttt ctttaaaaaa
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G + T          T A
                    T     C G C A C     A
    T C G A        A      | | | | |     G
  G         C T C G       G C G T G     C
  G         | | | |                 T T
  T         G A G C
    C C A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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