The detailed information of tRNA gene sequence


Sequence ID>WENV170670260
Genome IDLAHT01000661
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1758
End posion on genome 1684
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aggtgcttgc
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCATGCGTTCGAA
TCGCGTCGGGCCCACtt
Downstream region at tRNA end position 
gagcccaagt
Secondary structure (Cloverleaf model)
>WENV170670260	Val	GAC
                   c      ACtt gagcccaagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | + | | |     G
    T       T C T G       A T G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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