The detailed information of tRNA gene sequence


Sequence ID>WENV170670269
Genome IDLAHT01000793
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 7779
End posion on genome 7863
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgttattcgg
tRNA gene sequence 
GCCGGGGTAGTCTAGTCCGGAAAGGCGGTGGCCTTGAAAGCCACTGGTGCCCAGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGtga
Downstream region at tRNA end position 
taacgccaat
Secondary structure (Cloverleaf model)
>WENV170670269	Ser	TGA
                   g      Gtga taacgccaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G A A        G     TGGTGCCCAGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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