The detailed information of tRNA gene sequence


Sequence ID>WENV170670315
Genome IDLAHT01001843
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5338
End posion on genome 5265
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
taaaggggca
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACATCGCCCTTACACGGCGGGGATCACGCGTTCGAA
CCGCGTCGGGCCCAtct
Downstream region at tRNA end position 
tttctttttc
Secondary structure (Cloverleaf model)
>WENV170670315	Val	TAC
                   a      Atct tttctttttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     T G C G C     A
      C G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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