The detailed information of tRNA gene sequence


Sequence ID>WENV170670400
Genome IDLAHT01006240
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 2088
End posion on genome 2011
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
accagtagag
tRNA gene sequence 
GGGGTTGTAGGGTAGCCTGGTCCATCCTACAGCGTTCGGGACGCTGTGACCTGAGTTCGA
ATCTCAGCAACCCCATCA
Downstream region at tRNA end position 
tactcttcct
Secondary structure (Cloverleaf model)
>WENV170670400	Pro	CGG
                   g      ATCA tactcttcct
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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