The detailed information of tRNA gene sequence


Sequence ID>WENV170670405
Genome IDLAHT01006421
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 7028
End posion on genome 6954
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gatctcgttc
tRNA gene sequence 
GGGGTAGTAGGGTAGCCTGGTCCATCCTAGAGCGTTTGGGACGCTTTGACGGCAGTTCGA
ATCTGCCCTACCCCAtga
Downstream region at tRNA end position 
gcatggacag
Secondary structure (Cloverleaf model)
>WENV170670405	Pro	TGG
                   c      Atga gcatggacag
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C C G T C     A
    C C G A        A      | | | | |     G
  T         T G G G       G G C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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