The detailed information of tRNA gene sequence


Sequence ID>WENV170670456
Genome IDLAHT01013217
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 159
End posion on genome 86
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtgcggatc
tRNA gene sequence 
GGGCCCGTAGCTTAGCCAGGTTGAGCGCACGGCTGATAACCGTGAGGTCACGCGTTCAAA
TCGCGTCGGGCCCAtag
Downstream region at tRNA end position 
cagtctttta
Secondary structure (Cloverleaf model)
>WENV170670456	Ile	GAT
                   c      Atag cagtctttta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        A      | | | | |     A
    C       T T C G       A C G C G     C
    A       + | | |                 T T
    G       G A G C
      G T T        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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