The detailed information of tRNA gene sequence


Sequence ID>WENV170670458
Genome IDLAHT01013555
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1029
End posion on genome 954
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aggctgaagt
tRNA gene sequence 
GCCGGGGTAGGGTAGTTGGACATCCTTTGGGACTGTGGATCCCATGACCCGGGTTCGAAT
CCCGGCTCCGGCCTCA
Downstream region at tRNA end position 
attcatcgat
Secondary structure (Cloverleaf model)
>WENV170670458	His	GTG
                   t      CTCA attcatcgat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     G
    T       T G G G       C C G G G     C
    G         | | +                 T T
    G       T C C T
      A C A        T     TGAC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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