The detailed information of tRNA gene sequence


Sequence ID>WENV170670461
Genome IDLAHT01014157
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1216
End posion on genome 1293
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
taaaaggttt
tRNA gene sequence 
GGGGTTGTGGGGTAGCCTGGTCCATCCCTCGGCGTTCGGGACGCCGTAACCTGAGTTCGA
ATCTCAGCAACCCCACCA
Downstream region at tRNA end position 
tttgcctttc
Secondary structure (Cloverleaf model)
>WENV170670461	Pro	CGG
                   t      ACCA tttgcctttc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    C C G A        G      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | |                 T T
  G         T C C C
    T C C A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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