The detailed information of tRNA gene sequence


Sequence ID>WENV170670471
Genome IDLAHT01015807
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5316
End posion on genome 5389
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cgcctgtgaC
tRNA gene sequence 
GGATCCATGGGGTAGAGGATATCCTCTTGGGCTTCGGACCCAAGGACGCGGGTTCGATTC
CCGCTGGGTCCGTtt
Downstream region at tRNA end position 
ccttttaacc
Secondary structure (Cloverleaf model)
>WENV170670471	Arg	TCG
                   C      GTtt ccttttaacc
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     C - G
                     A - T          T T
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       T G G G       G C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          C     GGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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