The detailed information of tRNA gene sequence


Sequence ID>WENV170670472
Genome IDLAHT01015993
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1976
End posion on genome 2052
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
atggcccggc
tRNA gene sequence 
GGGCCCGTGGTCTAGGTGGTTATGACATCGCCCTTACACGGCGGGGATCACGCGTTCGAA
TCGCGTCGGGCCCATCA
Downstream region at tRNA end position 
gtccctcgtt
Secondary structure (Cloverleaf model)
>WENV170670472	Val	TAC
                   c      ATCA gtccctcgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      G G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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