The detailed information of tRNA gene sequence


Sequence ID>WENV170670497
Genome IDLAHT01023110
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 125
End posion on genome 210
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tattcaccat
tRNA gene sequence 
GCCGGGATAGTCTAGCCTGGTAAGGCGCAAGACTGGAAATCTTGTGGAGCGATGCTCCGC
CTGGGTTCAAATCCCAGTCCCGGCGCtt
Downstream region at tRNA end position 
tttaactaat
Secondary structure (Cloverleaf model)
>WENV170670497	Ser	GGA
                   t      GCtt tttaactaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    T       | | + |                 T T
    G       A G G C
      G T A        G     TGGAGCGATGCTCCGC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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